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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923882.1_cds_XP_016472360.1_64603
CDS Infomation

[gene=LOC107794391] [db_xref=GeneID:107794391] [protein=monocopper oxidase-like protein SKU5 isoform X2] [protein_id=XP_016472360.1] [location=complement(join(37022..37130,37349..37548,37799..37877,37970..38335,38680..39043,39681..39819,39913..40188,40271..40273))] [gbkey=CDS]
Sequence

ATGTGCAGGAATGGCATCCAGCAGAGAAAGGATTCATGGCAAGATGGTGTATCTGGCACA
AATTGTCCCATTCCTGCTGGCTGGAATTGGACATATGAGTTTCAGGTTAAAGACCAGATT
GGCAGTTTCTTTTATTTCCCTTCCCTAAGTTTCCAGAGAGCTGCTGGTGGATATGGAGGG
ATCACTATAAACAACAGAAAGATCATTTCTCTGCCGTTTGCAACACCAGATGGGGACATC
ACACTCTTTATTAGTGACTGGTTTATAAAGAGTCATAAGGAACTCAGACAAGACATTGAA
AACGGAGTTAGCCTTCGAGCTCCTGACAGTATACTATTCAATGGGCTAGGTCCTTACCGT
TACGATAATGCGCTTGTATCAGGTGGTATAGCCTACCTGTCAGTGAATGTAGAACCAGGC
AAAACATATCGCCTACGAGTACACAACGTTGGTGTTTCAACTAGCTTGAATTTCAGAATT
CAAAACCATAACCTTCTTCTTGTGGAGACTGAAGGTTCATACACAGTACAACAGAACTAC
ACAAGCTTGGATATCCACGTCGGTCAGTCGTACTCATTCCTGGTCACACTGGATCAAAAT
GCAAGCAGTGATTATTACATTGTTGCGAGTCCGCGCTTTGTTAATTCCTCTGGTTGGTCG
AAGTCGGTAGGAGTTGCTGTCTTGCATTACTCAAATTCACAAGGACCTGCTTCAGGCCCT
CTTCCAGACCCTCCTAATGAATCTGACACATTTTTCTCAATGAGTCAAGCGAGATCTATA
AGATGGAATGTTTCTGCTAGTGCTGCACGGCCAAACCCCCAAGGATCCTTCAGATATGGC
GAAATCACAGTGACTGATGTCTTTGTCCTTCATAATAGGCCTGCAGAGCTAATAGAGGGG
AAGCGGCGCACTACTCTCAGTGGTATTTCATACTTAGCGCCATCAACACCTCTAAAACTT
GCTCAGCAATTTAACGTCCCAGGTGTTTTCAAGCTGGACTTCCCCAATAAAATGATGAAC
AGGCCAGCAAAAGTTGATACGTCCATAATTAATGGTACTTACAAAGCATTCGTGGAAATT
ATATTCCAAAATAATGATACAACTGTTCAGAGCTATCATCTGGACGGCTATGCCTTTTTT
GTTGTCGGTATGGACTACGGGCTTTGGACAGAGAATAGTAGAAGCACCTACAACAAATGG
GATGGTGTTGCTCGATGCACTACCCAGGTGTTTCCAGGTGCTTGGACTGCCATTTTAGTC
TTCCTAGACAATGACGGCATTTGGAATTTACGTGCTCAAAACCTCGACTCGTGGTACCTT
GGCCAAGAAACTTATATTAGTGTTGTGAATCCGGAGACCACAGATAAAAATGATGTTCCA
CTTCCAGCAAACGTCATCTATTGTGGTGCACTGTCACCTTTACAGAAGGACCAAGCTCAC
AGAGTAAATTTCTCTGGTGCACCATCATTGAAAAAACCAATCAAATTGATATTTGTAGCA
TTTGTTCTAGCTCTAATTGGAAGTTTTATGAGGTAG

Peptide Sequence

PEP ID

XP_016472360.1
PEP Infomation

PREDICTED: monocopper oxidase-like protein SKU5 isoform X2 [Nicotiana tabacum]
Sequence

MCRNGIQQRKDSWQDGVSGTNCPIPAGWNWTYEFQVKDQIGSFFYFPSLSFQRAAGGYGG
ITINNRKIISLPFATPDGDITLFISDWFIKSHKELRQDIENGVSLRAPDSILFNGLGPYR
YDNALVSGGIAYLSVNVEPGKTYRLRVHNVGVSTSLNFRIQNHNLLLVETEGSYTVQQNY
TSLDIHVGQSYSFLVTLDQNASSDYYIVASPRFVNSSGWSKSVGVAVLHYSNSQGPASGP
LPDPPNESDTFFSMSQARSIRWNVSASAARPNPQGSFRYGEITVTDVFVLHNRPAELIEG
KRRTTLSGISYLAPSTPLKLAQQFNVPGVFKLDFPNKMMNRPAKVDTSIINGTYKAFVEI
IFQNNDTTVQSYHLDGYAFFVVGMDYGLWTENSRSTYNKWDGVARCTTQVFPGAWTAILV
FLDNDGIWNLRAQNLDSWYLGQETYISVVNPETTDKNDVPLPANVIYCGALSPLQKDQAH
RVNFSGAPSLKKPIKLIFVAFVLALIGSFMR

Transcript Sequence

Gene sequence data has not been registered.